Publications

2024

Abi Younes, J.N.; Campbell, J.R.; Otto, S.J.G.; Gow, S.P.; Woolums, A.R.; Jelinski, M.; Lacoste, S.; Waldner, C.L. (2024). Variation in pen-Level prevalence of BRD bacterial pathogens and antimicrobial resistance following feedlot arrival in beef calves. Antibiotics 13(4), 322, 13040322. Click here to access.

Adewusi O.O., Waldner C.L., Hanington P.C., Hill J.E., Freeman C.N., Otto S.J.G. (2024). Laboratory tools for the direct detection of bacterial respiratory infections and antimicrobial resistance: a scoping review. Journal of Veterinary Diagnostic Investigation. 0, 10406387241235968. Click here to access.

2023

McCubbin, K. D., de Jong, E., Smid, A. M. C., Ida, J. A., Bodaneze, J., Anholt, R. M., Larose, S., Otto, S.J.G., Barkema, H. W. (2023). Perceptions of antimicrobial stewardship: Identifying drivers and barriers across various professions in Canada utilizing a One Health approach. Frontiers in Public Health, 11, 1222149. Click here to access

Neustaedter, C. M., Robertson, K., Tschritter, D., Reid-Smith, R. J., MacKinnon, M. C., Murphy, C. P., Chapman, B., Neumann, N.F., Otto, S. J.G. (2023). A scoping review of factors associated with antimicrobial-resistant Campylobacter species infections in humans. Epidemiology & Infection, 1-43. Click here to access


Strong, K. M., Marasco, K. L., Invik, J., Ganshorn, H., Reid-Smith, R. J., Waldner, C. L., Otto, S.J.G., Kastelic, J.P., Checkley, S. L. (2023). Factors associated with antimicrobial resistant enterococci in Canadian beef cattle: A scoping review. Frontiers in Veterinary Science, 10, 1155772. Click here to access

2022

Freeman, C. N., Herman, E. K., Abi Younes, J., Ramsay, D. E., Erikson, N., Stothard, P., Links, M.G., Otto, S.J.G., & Waldner, C. (2022). Evaluating the potential of third generation metagenomic sequencing for the detection of BRD pathogens and genetic determinants of antimicrobial resistance in chronically ill feedlot cattle. BMC Veterinary Research, 18(1), 1-15. Click here to access

Yu, D., Ryu, K., Zhi, S., Otto, S. J.G., & Neumann, N. F. (2022). Naturalized Escherichia coli in Wastewater and the Co-evolution of Bacterial Resistance to Water Treatment and Antibiotics. Frontiers in Microbiology, 13, 810312. Click here to access

Yu, D., Ryu, K., Otto, S. J.G., Stothard, P., Banting, G., Ruecker, N., Neumann, N.F., & Zhi, S. (2022). Differential survival of potentially pathogenic, septicemia-and meningitis-causing E. coli across the wastewater treatment train. npj Clean Water, 5(1), 33. Click here to access

de Jongh, E.J., Harper, S.L., Yamamoto, S.S., Wright, C.J., Wilkinson, C.W., Ghosh, S., Otto, S.J.G. (2022). One Health, One Hive: A scoping review of honey bees, climate change, pollutants, and antimicrobial resistance. PLoS One, 17(2), e0242393. Click here to access


Otto, S.J.G., Haworth-Brockman, M., Miazga-Rodriguez, M., Wierzbowski, A., Saxinger, L.M. (2022). Integrated surveillance of antimicrobial resistance and antimicrobial use: Evaluation of the status in Canada (2014–2019). Canadian Journal of Public Health, 113(1). Click here to access


Otto, S.J.G., Haworth-Brockman, M., Miaza-Rodriguez, M., Wierzbowski, A., Saxinger, L.M. (2022). Integrated surveillance of antimicrobial resistance and antimicrobial use: Evaluation of the status in Canada (2014-2019). Canadian Veterinary Journal, 63(2), 161-170. Click here to access

McCubbin, K.D., Barkema, H.W., Babujee, A., Forseille, J., Naum, K., Buote, P., Dalton, D., Checkley, S.L., Lehman, K., Morris, T., Smilski, K., Wilkins, W.L., Anholt, R.M., Larose, S., Saxinger, L.M., Blue, D., Otto, S.J.G. (2022). One Health and antimicrobial stewardship: Where to go from here?. Canadian Veterinary Journal, 63(2), 198-200. Click here to access

2021

McCubbin, K., Anholt, M., De Jong, E., Ida, J. A., Nobrega, D., Conly, J. M., ... & Barkema, H. W. (2021). Knowledge gaps in the understanding of antimicrobial resistance in Canada. Frontiers in Public Health, 1523. Click here to access

Haworth-Brockman, M., Saxinger, L. M., Miazga-Rodriguez, M., Wierzbowski, A., & Otto, S. J. (2021). One Health Evaluation of Antimicrobial Use and Resistance Surveillance: A Novel Tool for Evaluating Integrated, One Health Antimicrobial Resistance and Antimicrobial Use Surveillance Programs. Frontiers in Public Health, 1119. Click here to access


Poth, C. N., Bulut, O., Aquilina, A. M., & Otto, S. J. (2021). Using Data Mining for Rapid Complex Case Study Descriptions: Example of Public Health Briefings During the Onset of the COVID-19 Pandemic. Journal of Mixed Methods Research, 15586898211013925. Click here to access


Narbonne, J. A.
, Radke, B. R., Price, D., Hanington, P. C., Babujee, A., & Otto, S. J. G. (2021). Antimicrobial use surveillance indicators for finfish aquaculture production: a review. Frontiers in Veterinary Science, 8, 175. Click here to access


Pinto, K. R., Chicoine, A. L., Romano, L. S., & Otto, S. J. (2021). An Internet survey of risk factors for injury in North American dogs competing in flyball. The Canadian Veterinary Journal= La Revue Veterinaire Canadienne, 62(3), 253-260. Click here to access abstract.

2020

Hannon, S. J., Brault, S. A., Otto, S. J., Morley, P. S., Mcallister, T. A., Booker, C. W., & Gow, S. P. (2020). Feedlot Cattle Antimicrobial Use Surveillance Network: A Canadian Journey. Frontiers in Veterinary Science, 7, 968. Click here to access

Otto, S. J., Levett, P. N., Reid-Smith, R. J., Pearl, D. L., Daku, D., Nagle, E., ... & McEwen, S. A. (2020). Antimicrobial Resistance of Human Campylobacter Species Infections in Saskatchewan, Canada (1999–2006): A Historical Provincial Collection of All Reported Cases. Foodborne pathogens and disease. Click here to access

Reynolds, C., Checkley, S., Chui, L., Otto, S., & Neumann, N. F. (2020). Evaluating the risks associated with Shiga-toxin-producing Escherichia coli (STEC) in private well waters in Canada. Canadian Journal of Microbiology, 66(5), 337-350. Click here to access

Zhi, S., Stothard, P., Banting, G., Scott, C., Huntley, K., Ryu, K., ... & Ruecker, N. J. (2020). Characterization of water treatment-resistant and multidrug-resistant urinary pathogenic Escherichia coli in treated wastewater. Water Research, 115827. Click here to access

2019

Brault, S. A., Hannon, S. J., Gow, S. P., Warr, B. N., Withell, J., Song, J., ... & Morley, P. S. (2019). Antimicrobial use on 36 beef feedlots in Western Canada: 2008–2012. Frontiers in veterinary science, 6, 329. Click here to access

Brault, S., Hannon, S. J., Gow, S. P., Otto, S. J., Booker, C. W., & Morley, P. S. (2019). Calculation of antimicrobial use indicators in beef feedlots-effects of choice of metric and standardized values. Frontiers in veterinary science, 6, 330. Click here to access

Zhi, S., Banting, G., Stothard, P., Ashbolt, N. J., Checkley, S., Meyer, K., ... & Neumann, N. F. (2019). Evidence for the evolution, clonal expansion and global dissemination of water treatment-resistant naturalized strains of Escherichia coli in wastewater. Water research, 156, 208-222. Click here to access

2018

Otto, S. J., Ponich, K. L., Cassis, R., Goertz, C., Peters, D., & Checkley, S. L. (2018). Antimicrobial resistance of bovine Salmonella enterica ssp. enterica isolates from the Alberta Agriculture and Forestry Disease Investigation Program (2006–2014). The Canadian Veterinary Journal, 59(11), 1195. Click here to access

Otto, S. J., Szkotnicki, J., McElwain, C., So, I., Weese, J. S., & Prescott, J. F. (2018). Building the antimicrobial stewardship leadership plan for animal health in Canada (workshop, Ottawa, October 3–4, 2017). The Canadian Veterinary Journal, 59(7), 746. Click here to access

2017

Anholt, R. M., Klima, C., Allan, N., Matheson-Bird, H., Schatz, C., Ajitkumar, P., ... & McAllister, T. (2017). Antimicrobial susceptibility of bacteria that cause bovine respiratory disease complex in Alberta, Canada. Frontiers in veterinary science, 4, 207. Click here to access

2016

Van den Heever, J. P., Thompson, T. S., Otto, S. J., Curtis, J. M., Ibrahim, A., & Pernal, S. F. (2016). Evaluation of Fumagilin-B® and other potential alternative chemotherapies against Nosema ceranae-infected honeybees (Apis mellifera) in cage trial assays. Apidologie, 47(5), 617-630. Click here to access

van den Heever, J. P., Thompson, T. S., Otto, S. J., Curtis, J. M., Ibrahim, A., & Pernal, S. F. (2016). The effect of dicyclohexylamine and fumagillin on Nosema ceranae-infected honey bee (Apis mellifera) mortality in cage trial assays. Apidologie, 47(5), 663-670. Click here to access

2014

Otto, S. J., Carson, C. A., Finley, R. L., Thomas, M. K., Reid-Smith, R. J., & McEwen, S. A. (2014). Estimating the number of human cases of ceftiofur-resistant Salmonella enterica serovar Heidelberg in Quebec and Ontario, Canada. Clinical Infectious Diseases, 59(9), 1281-1290. Click here to access

2013

St. Amand, J. A., Otto, S. J., Cassis, R., & Annett Christianson, C. B. (2013). Antimicrobial resistance of Salmonella enterica serovar Heidelberg isolated from poultry in Alberta. Avian pathology, 42(4), 379-386. Click here to access

2012

Appel, S., Otto, S. J., & Weese, J. S. (2012). Cystotomy practices and complications among general small animal practitioners in Ontario, Canada. The Canadian Veterinary Journal, 53(3), 303. Click here to access